mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GAAGCTCGTTTCTACAGGTATCT CTACCCTGTAGAACCGGGCTTTTG CACGAGCCCTTCGTAATCTACCCTGTAGAACCGGGCTTTTGTAGACTAGCGACCCTTTCAGAAGCTCGTTTCTACAGGTATCTTGCGAAATC 3 1 3' arm Ixodes_scapularis mirbase 100 api-mir-993 0.0000000003 -34.8 .........(((((((..((((.(((((((.((((((((((.((..........))..)))))))))).)))))))))))..)))))))... (-34.80)