mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TAAGGCACGCGGTGAATGCCAAG CCTCGTGTTCATTGTTGTGCCTTTTG AAGACACACAGTTCTCCTCGTGTTCATTGTTGTGCCTTTTGTATTATTGAATTCGGATCATAAGGCACGCGGTGAATGCCAAGAGCACGGCCCAACATTCG 3 3 3' arm Daphnia_pulex mirbase mir-124 0.000000001 isc-mir-124 0.000000001 -28 ..........(((((....(((((((((((.(((((((.((.(((...(....).))))).))))))))))))))))))..)))))............... (-28.00)