mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TAGGAACTTCATACCGTGCTCT AGCGAGGTATAGAGTTCCTACG GACGTGTCGCTAGCGAGGTATAGAGTTCCTACGTCTTGTCACTGAATTCAAGTCGATTGGTAGGAACTTCATACCGTGCTCTCGACGCCAATCCGATAGTC 5 0 3' arm Daphnia_pulex mirbase mir-276 0.0000004 aae-mir-276-1 0.00000002 -38.8 ...((((((..((((.(((((..(((((((((.....((((((.......))).)))..)))))))))..))))).))))..))))))............. (-38.80)