mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TTTGTACTTTATCAGGTGCTCT GGCCCCTGTGCAAGTACATAGC AGTAGAGAAGTGACCTGCTTTGTACTTTATCAGGTGCTCTGTTTGAAATTTACCTCAGGGCCCCTGTGCAAGTACATAGCTGGTTGTTCTCATCCTCGCCGA 5 0 5' arm Daphnia_pulex mirbase 100 100 -39.04 ....(((((.(((((.(((.(((((((...((((.((((((..............)))))).))))...))))))).))).))))))))))........... (-39.04)