mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GTGAACCGGTTCCGGTTCGGC CGGACCGGGGGTGGTGTGCTG CAACGGGGAGCGACAAGAGCGGTGAACCGGTTCCGGTTCGGCCCAGGGGTCGGAGCGAGATCGCGTCCGATCCTGTCGGACCGGGGGTGGTGTGCTGGATCGGGTCGCG AAGACAATAAAAACGATTGGATCTCCTCTCAAACTTATGCTCAAAGTACAGAGGGTATGTCTTTCAGAACAGTCAACAGAACAGTTTAGCTAGGAATTAAAAATATGTATATAGATTCTTCTACTCTCTATTGGCACGTGGTTGAAGAGGACCAAACACCAACAGAAGAACTTGGGTGTTAAAGCCTCCTATGAGCACAACAAATTTTGCTATAAATTGGGACGTTAGGTGGTGAAAATCTGCCACCTGGTCAGTTTTCATCTTCTGTGATTTCTTTTGCCATGTGAAAATTGATGTCAGTTCCAGAGGGACAAAGGATACATGCACTGAATTGGTATAGAGAACCCATCTCTGTAGCAAAATGTGTTTGTCTTCGTCCTCGGAAAAGAATTCAACTTCATAGCCACCATTCATCCACTGGAACTGGGCCGAGTCCCGCGGCCCAAGACCCCCGCATCCGAGACGCCACCCGGCCCAACCCTTCTCATCCTGTCCGGGCCGCCACCCGACTTGGGCCGGCCGTTGGGCCGAAGTTCGGGCCCGGGCGGGGGAGCCTCCTCCCTGGGAACGAACCCGGGCCGAAGGTGTGGCGGTACGAACTTGTCCGTCTTGGGCGGCTGAGGAGAGAGCAAGGGCAAGTCCTTGTCGGGGCTGGAAACAACGGGGAGCGACAAGAGCGGTGAACCGGTTCCGGTTCGGCCCAGGGGTCGGAGCGAGATCGCGTCCGATCCTGTCGGACCGGGGGTGGTGTGCTGGATCGGGTCGCG 2 0 5' arm Glycine_max mirnest 100 100 -55.3 .........(((((..((.(((((.((((.((((((((((((...((((((((((((....))).))))))))))))))))))))).)))).)))))..))..))))). (-55.3)