mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TAGCACCATGAGATTCAGC TGAACTCTCGTGGGTCTGCA AAGAACCAATACCCGAACTGAACTCTCGTGGGTCTGCAGTTGATATTTCGAAAGCTTGTAGCACCATGAGATTCAGCTCCGGTGTTGGTTCG 3 1 3' arm Aedes_aegypti mirbase 100 cqu-mir-998 0.00000000007 -46.4 ..(((((((((((.((.(((((.((((((((..((((((((((....))))....))))))..))))))))))))).)).))))))))))). (-46.40)