mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGCGAGTGTCTTCGCCTCTG GAGGCGTAGATACTCACACC CGGTGCTGGCATTCTCAAGCCAGTGAAATCGGTGCGAGTGTCTTCGCCTCTGAGAGAGATACTATGAGATCTCAAGCCTCGGAGGCGTAGATACTCACACCTCTTTTTCTGGCTATCTCACCACTGCTCT CGGTGCTGGCATTCTCAAGCCAGTGAAATCGGTGCGAGTGTCTTCGCCTCTGAGAGAGATACTATGAGATCTCAAGCCTCGGAGGCGTAGATACTCACACCTCTTTTTCTGGCTATCTCACCACTGCTCTTTTCCGCCGGGGCACGAAGGTCCTTCGCCTCACCAAATTTCGTTCTTTAAATTTCACCTATATATGT 2 0 5' arm Glycine_max mirnest 100 gso-MIR2109 4e-50 -53.5 (((((.(((.((.....((((((.((((..((((.((((((((.((((((((((.(((((........)))))....)))))))))).)))))))).))))..)))).)))))))).))).))))).... (-53.5)