mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCGGTGGGATCTTCGTCCGTTT CCGGACGAACTTCCCAGCTCGGCC GTATCAAGTGCTACGCCCGGACGAACTTCCCAGCTCGGCCGACAATCAGGGGTCGGTGGGATCTTCGTCCGTTTGTATCGCTTATAC 4 2 3' arm Bombyx_mori mirbase mir-278 3e-41 isc-mir-278 0.0003 -40.6 ((((.(((((.((((..((((((((..(((((.(.(((((..........)))))))))))..))))))))..)))).))))))))) (-40.60)