mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGGAGAAGCAGGGCACGTGCA CATGTGCCCTTCTTCTCCATC AGGATGGCGAGGTGCGCGAGGTGGAGAAGCAGGGCACGTGCATTCATTCGTTCCATCGACGGTCTGGCGCCGACTCACGCATCGCCGGCGCGGCGAGCTGAGCGCGCGACACGGAAGCAGGTCCGCCGCGCCGGCGGCGCCCGCTGGCCGATCGACCGGCTAACTATAGCTAGCTCCAGGAAGCAAGCCAGGCCAGCCAGCCAGCCGATCGATGCTTGCGCGTGCATGTGCCCTTCTTCTCCATCGGGCACGCCTCGCCTGCG ATTACAGGGTCGACCCAGCGTCCGCTAGCTGTCANGAGCGCAGGAGGGGGAGCAAAACCGCGCGGTGCGTATGCCGCTCAGCTCAGCTCAGCTCACCCGCTAGCTCCGGCATGCATGGGCAGCTCCGGCGCGCGCGGAGGATGGCGAGGTGCGCGAGGTGGAGAAGCAGGGCACGTGCATTCATTCGTTCCATCGACGGTCTGGCGCCGACTCACGCATCGCCGGCGCGGCGAGCTGAGCGCGCGACACGGAAGCAGGTCCGCCGCGCCGGCGGCGCCCGCTGGCCGATCGACCGGCTAACTATAGCTAGCTCCAGGAAGCAAGCCAGGCCAGCCAGCCAGCCGATCGATGCTTGCGCGTGCATGTGCCCTTCTTCTCCATCGGGCACGCCTCGCCTGCGCATCTTCTGTGACTGTGCATGCAAGTAAGCAAAAAGACGGTCAGGATCAGGTATCACTGGAAGTGGCGCATGGTGGATGTTGCGCTGTGCTCGTGAGAGGTCTAGGTCATCGTCTCCCAGTTGACTTCTGCGCCAAGGACAATCCTTAGTTCGTTTTATAATTATCTTTTATTTTGTAATAAGACTTCCGCTATGTAATAAATACTCTGATTATTGTGACATTTATCTCTATACACTCTGTTATTATATATGTTGNCTTTCTTGGGCGCANTTNAAAAAANTTTAACNCTTACAATTTNGGTGGCNCTNTTAAGGGAAATGGGCGACGAAACCCCAATAAAATAATGGGGGCCGGCCGCTTTAAAGGATCCAAACTTACGTACGCCTGGCATGGCAAATTATTATTTTTTTTTTTAGTGGCACCCTAAATNAAATTACCGGGCCGCCGTTTTCAACCGCCGGAATGTGGAAAACCCGGGGTTACCCAATTT 1 0 5' arm Zea_mays mirnest MIR164 0.0000000003 zma-MIR164h 3e-62 -129.3 .....(((((((((.((..((((((((((.(((((((((((((.....(((..(((((((((.(((((..........((.((((((((((((((.(((..((.((.....))...)).))).)))))))))))))).))..(((((((........((((.......(((..((...)).))).)))).)))))))..)))))))).))))))...))).))))))))))))).))))))))))..)).))))))))).... (-129.3)