mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TAGCACCATGAGATTCAGC TGAACTCTCGTGGGTCTGCA ACAGATGTTGGCCAATTCCGGGACTGAACTCTCGTGGGTCTGCAGTGCTTTTCGTTGGAACTTGTAGCACCATGAGATTCAGCTCCGGTGCTGGTCTTGTTTCG 3 1 3' arm Culex_quinquefasciatus mirbase 100 aae-mir-998 0.00000000008 -43.7 ...((....(((((...((((..(((((.((((((((..(((((((.((.......)).)).)))))..)))))))))))))..))))...))))).....)). (-43.70)