mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure ATAAAGCTAGACAACCATTGA TTTGGTCGTCCAGCCTTAGGTGA TTGCAATTAGTTTCTTTGGTCGTCCAGCCTTAGGTGATTTTTCCGGTCATAAAGCTAGACAACCATTGAAGTTCGTTGTGG 7 2 3' arm Drosophila_melanogaster mirbase 100 dme-mir-4 9e-41 -24.3 (..((((.(..(((..((((.(((.(((.....((((((.....))))))...))).))).))))..)))..).))))..) (-24.30)