mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TAAAGCTAGATTACCAAAGCAT GCTTTGGCGCTTTAGCTGTATG TGAAGCTGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCTTCTGCAGGTCA 5 0 3' arm Drosophila_melanogaster mirbase mir-9 7e-24 dme-mir-79 3e-50 -36.1 .((..(((....((((.((((((((...(((((((.((((((((.......)))..))))).)))))))...)))))))).)))).....))).)). (-36.10)