mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure ACAGGAAAGGGAAAAAGGCGTA TGTCTTTTTCCGCTTACTGGCG AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCAATTCCACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTT 3 2 3' arm Drosophila_melanogaster mirbase mir-316 1e-25 dme-mir-316 2e-45 -29 ((((((((((.(((.(((((((((((.(((.(((.((((..........)))).)))..)))))))))))))).))).)))).)))))) (-29.00)