mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GCCAACTTCCGTTCTGCGTTTCG AGAGCGCAGATAGGGAGTGGGAGC GAAGAGGCTGAGAGCGGGAAAGTGAGAAGTAGAGAGCGCAGATAGGGAGTGGGAGCTTATACCGTTATAAAGCCAACTTCCGTTCTGCGTTTCGTTCCAACCCCCCACCTCTCTTTCCCTCT 5 1 3' arm Drosophila_melanogaster mirbase 100 100 -44.7 ..(((((..(((((.(((....((.(((...((((.((((((..((((((.((...(((((....)))))..)).))))))..)))))))))).)))))....)))..)))))....))))) (-44.70)