mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCACTGGGCAAAGTGTGTCTCA GGATGCATTTTGTGCAGATGTC TGGGATGCATTTTGTGCAGATGTCTAACGATTGGAAACCCATCACTGGGCAAAGTGTGTCTCAAA 4 0 3' arm Drosophila_mojavensis mirbase mir-3 4e-30 dvi-mir-3 0.00000000005 -27.4 (((((((((((((((.(((..(((....)))(((....)))...))).))))))))))))))).. (-27.40)