mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGGAATGTAAAGAAGTATGGAG CCATGCTTCCTTGCATTCAATA GCCTTTGAGAGTTCCATGCTTCCTTGCATTCAATAGTATAACATAAAGCATATGGAATGTAAAGAAGTATGGAGCGAAATCTGGCAAG 2 0 3' arm Drosophila_pseudoobscura mirbase mir-1 2e-27 dpe-mir-1 3e-44 -34.8 (((...((..((((((((((((.((((((((.(((((..........)).))).)))))))).))))))))))))....)).)))... (-34.80)