mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGGCAAGATGTCGGAATAGCTGA GGCTATGCCTCATCTAGTCAAT AATTTGGCAAGATGTCGGAATAGCTGAGAGCAAAAAGAAGATGATTTGAAATGCGGCTATGCCTCATCTAGTCAATTGCATTCATTTGA 4 1 5' arm Drosophila_pseudoobscura mirbase mir-31 1e-40 dpe-mir-31b 2e-38 -22.8 ...(((((.(((((..((.(((((((....((((..........)))).....))))))).)).))))).))))).............. (-22.80)