mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TAAGGCACGCGGTGAATGCCAAG TCTCCTGGTATCCACTGTAGGCCTATATG TCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTACTA 3 6 3' arm Drosophila_pseudoobscura mirbase mir-124 2e-27 dpe-mir-124 8e-48 -33.2 ..((((.((.((((((.....((((((.((((((..((((.((((.........))))))))..)))))).)))))))))))).)).))))....... (-33.20)