mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGTGTTGAAAATCGTTTGCAC GTGAGTGTGGGGCCTGAAATTTTGCACACATT ATGTGTGAGTGTGGGGCCTGAAATTTTGCACACATTTACAATAATTGTAAATGTGTTGAAAATCGTTTGCACAACTGTGA 4 11 3' arm Drosophila_pseudoobscura mirbase mir-287 2e-36 dpe-mir-287 3e-37 -19 .((((..((((...........(((((..(((((((((((.....)))))))))))..)))))))))..))))....... (-19.00)