mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AATCACAGGATTATACTGTGAG CGCAGTATATTTTTGTGTTTTGTTG CTCGCAGTATATTTTTGTGTTTTGTTGTGTCTGAAACGCAAATCACAGGATTATACTGTGAG 3 3 3' arm Drosophila_pseudoobscura mirbase mir-308 3e-28 dpe-mir-308 1e-29 -27.2 (((((((((((.(((((((.....((((((.....))))))..))))))).))))))))))) (-27.20)