mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TAAAGTAAATAGTCTGGATTGATGA ATCAACAGGCATTTACTTCAAC ATGTTGGACTGTGTTTAAAGTAAATAGTCTGGATTGATGAAAGTTGCATTCGAGAATTCATCAACAGGCATTTACTTCAACTGCAGTTTGAACA 2 3 5' arm Drosophila_simulans mirbase mir-987 5e-46 dme-mir-987 8e-48 -29.4 ...(..((((((..((.((((((((.(((((...(((((((..((.......))..))))))).))))))))))))).))..))))))..)... (-29.40)