mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGTGATGTGACGTAGTGGAACA TTTCATTTTGCGTCTTTTG TGCCGAGATAAGTTTCATTTTGCGTCTTTTGAATTCGAATAGTTCATGTGATGTGACGTAGTGGAACATACCTGAAATTGCA 6 3 3' arm Drosophila_simulans mirbase 100 dme-mir-989 4e-37 -17.3 ...........(((((((((..((((...((((((.....))))))...))))..)...))))))))............... (-17.30)