mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGTCTTTTTCCGCTTACTGGCG ACAGGAAAGGGAAAAAGGCGTA AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTT 2 2 5' arm Drosophila_yakuba mirbase mir-316 4e-28 dya-mir-316-1 2e-45 -29 ((((((((((.(((.(((((((((((.(((.(((.((((..........)))).)))..)))))))))))))).))).)))).)))))) (-29.00)