mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TTCTTGCTCAGGGTTTAC ACAACCGTGAGTGGAGACC TTTATCCAATTCTCAGGATTCTTGCTCAGGGTTTACTAAATATGAAATATGTACAACCGTGAGTGGAGACCTGAGGGTTGGTCAGT 5 1 5' arm Tribolium_castaneum mirbase 100 tca-mir-3811b 1e-43 -34.64 .....((((((((((((.(..(..((((.(((((((..............))).)))).))))..)..)))))))))))))..... (-34.64)