mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AGGCAAGATGTTGGCATAGCTGA AGCAGTGCCACATTAGGCCAT TCATGGGACACGGGACAAGGCAAGATGTTGGCATAGCTGAACATGATAACGATTAGGCTCTAGTTTAGAGCCTAATCAATTTGCATAGAGCTTCAGCAGTGCCACATTAGGCCAT 4 1 5' arm Brugia_malayi mirbase mir-31 3e-57 crm-mir-72 0.000001 -46.1 ..................(((..(((((.(((((.(((((..........((((((((((((...)))))))))))).....((.....)).))))).))))))))))..))).. (-46.10)