mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AACCCGTAGATCCGAACTTGTG TGAGGTCGGCATTCGGGTAGA GTGTGAGGTAGCACACGGTCAACCCGTAGATCCGAACTTGTGTTGAGATTTTCTTCCGAACATGAGGTCGGCATTCGGGTAGACTGCGTGT 8 1 5' arm Brugia_malayi mirbase mir-10 2e-36 bfl-mir-100 0.0000003 -36.6 ..........((((.(((((.(((((.....((((.((..((((..((......))..))))..)).))))....))))).))))).)))) (-36.60)