mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TACAAAGTATTTGAAAAGTCGTGC CCGATTTTTCAATAGTTTGAAAC TATAGAATTTTGGCGTCGGAGCCCGATTTTTCAATAGTTTGAAACCAGTGTACACATAAATGGTTACAAAGTATTTGAAAAGTCGTGCTCTGAAAATGAATTCTTA 3 1 3' arm Caenorhabditis_elegans mirbase mir-85 3e-54 crm-mir-85 0.00000000009 -40.1 ...(((((((.....(((((((.(((((((((((((.((((.((((((((....)))...))))).)))).)).))))))))))).)))))))....))))))).. (-40.10)