mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AATCACAGTCAACTGTTGGC CTTCAGTTGCCTCGTGATCCG AGGGTCTTCGGACCACGCCTTCAGTTGCCTCGTGATCCGCCAAACACAATAAATGGACGAATCACAGTCAACTGTTGGCATGGTGCTCGTACCCATTTT 4 1 3' arm Caenorhabditis_elegans mirbase mir-250 2e-39 cbr-mir-250 1e-18 -38.5 .((((....(.((((.(((..((((((.((.(((((.(((((...........))).)).))))))).))))))..))).)))).)....))))..... (-38.50)