mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCCGCTTCTAACTTCCATTTGCAG GGAAATGGATTAGAACCGTGAAA GGCCTGAAACTTACGTCTCCGCTTCTAACTTCCATTTGCAGAGTTCATCAATTCTCTGGAAATGGATTAGAACCGTGAAATGTTAGTATGATGGTCC 2 3 5' arm Caenorhabditis_remanei mirbase 100 cel-mir-788 0.000000000005 -33.4 ((((....(((.((((.((((.((((((..(((((((.(((((..........))))).))))))))))))).)).)).)))).))).....)))). (-33.40)