mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TATCACAGCCGGACTGCTGATC CCGGCAGTTCTGCGCGTGATGCG GAACGAGTATAGATCACGTAGCTGACCGGCAGTTCTGCGCGTGATGCGTGGTAGTTATAAGCATCCGTATCACAGCCGGACTGCTGATCTGCCGATCTTGCTTCTTCT 3 1 3' arm Pristionchus_pacificus mirbase 100 100 -45.5 (((.(((((.(((((.....((.((.(((((((((.((..((((((((.(((.((.....))))))))))))).)).))))))))).)).)).)))))))))).))). (-45.50)