mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TTCGCAAGGATTCCTCAAGATC TCTTCAGGATCCCTGTCTGAACA ATTCGATACGCCTCTGATCTTCAGGATCCCTGTCTGAACACCGAAATTGAGTGTTCGCAAGGATTCCTCAAGATCAGGGCCTCGAATC 5 1 3' arm Pristionchus_pacificus mirbase mir-2241 1e-43 ppc-mir-2241a-5 2e-42 -39.7 ((((((...(((.((((((((.((((..(((...(((((((((....)).)))))))..)))..)))).))))))))))).)))))). (-39.70)