mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TTCGCAAGGTTTCCTCAAGATC TCTTCAGGATCCCTGTCTGAACA GCTCTATTCGATACGCCTCTGATCTTCAGGATCCCTGTCTGAACACAGAAATTGAGTGTTCGCAAGGTTTCCTCAAGATCAGGGCTTCGAGTCAGCT 5 1 3' arm Pristionchus_pacificus mirbase mir-2241 1e-37 ppc-mir-2241b-2 3e-50 -44.2 (((..((((((...(((.((((((((.((((..(((...(((((((.........)))))))..)))..)))).))))))))))).)))))).))). (-44.20)