mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TAAGGCACGCGGTGAATGCCA GTGTTCACTGTGAAAGCCTTGGT AATCCAAAATGGCGGATCTGTTAGTGTTCACTGTGAAAGCCTTGGTGTAATTAAAACTATTAAGGCACGCGGTGAATGCCAATAGGTCGTCAATATCTTCT 2 2 3' arm Lottia_gigantea mirbase mir-124 0.0000004 cte-mir-124 0.00000002 -38.5 .........(((((.(((((((.((((((((((((...((((((((((.......)).)))))))).)))))))))))).))))))))))))......... (-38.50)