mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TATCACAGCCGTGCTTAAGGGC CCTTGTTCGACTGTGATGTG TTCAGGCGCAACCCTTGTTCGACTGTGATGTGATTGAAATTAGCCCATATCACAGCCGTGCTTAAGGGCTTCGTCGAAA 4 2 3' arm Schistosoma_japonicum mirbase 100 sja-mir-2c 1e-39 -28.12 (((.((((...((((((..((.((((((((((.............)))))))))).))....))))))...))))))). (-28.12)