mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AGGCAAGATGCTGGCATAGCTGA AGCTATTCAGGATCTTTCCCTG ATTGATAATGACAAGGCAAGATGCTGGCATAGCTGATAAACTATTTATTACCAGCTATTCAGGATCTTTCCCTGAATATATCAAT 4 1 5' arm Schmidtea_mediterranea mirbase mir-31 0.00007 sme-mir-31b-3 3e-28 -27.2 (((((((....((.((.(((((.((((.(((((((.(((........))).))))))))))).))))).)).))....))))))) (-27.20)