mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AGGCAAGATGCTGGCATAGCTGA AGCTATTCAGGATCTTTCCATG CAAGGCAAGATGCTGGCATAGCTGATAAACTATTTATTACCAGCTATTCAGGATCTTTCCATGA 4 1 5' arm Schmidtea_mediterranea mirbase mir-31 0.0002 sme-mir-31b-3 9e-31 -22.9 ((.((.(((((.((((.(((((((.(((........))).))))))))))).))))).)).)). (-22.90)