mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CTGAAGTGTTTGGAGGAACTT GTTCCTTCAATCACTTCGCCG CTCACAGCTGGTTCTCAATGCCGGGAGTTCCTTCAATCACTTCGCCGAATCCGAAAGCATTTCACTGAAGTGTTTGGAGGAACTTCGGGCGTCACTGAACTGC 2 0 3' arm Picea_abies mirbase 100 aly-MIR395i 0.00008 -47.2 ......((.(((((...(((((.(((((((((((((.(((((((..(((..(....)...)))..))))))).))))))))))))).)))))....))))))) (-47.20)