mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCGGACCAGGCTTCATTCCCC GGACTGCAGCCTGGCACGAGA GGCAGAGTTGGGGTGAGGGGACTGCAGCCTGGCACGAGACCTGAAAACTTTTCTGACAAGCAGCCGGGCGGGCAGAGTCACGCATGGTGTCGGACCAGGCTTCATTCCCCTCACAACACTCTTCC 4 0 3' arm Pinus_taeda mirbase mir-166 0.000002 smo-MIR166c 0.00000003 -63.8 ((.(((((.(..(((((((((.((.(((((((..(((.(((((.......(((((.(..((......))..)))))).....)).))).)))..))))))).)).)))))))))..)))))).)) (-63.80)