mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TATGATGCAGATTCTTCATCT ACGAAGGTCTGCATCATAGT GACAGCGTGCCGTCTCATTTCCTTCCGCTAGTCTATGATGCAGATTCTTCATCTGTTTCGTGTGATGCTTGTGCACGAGTCAGACGAAGGTCTGCATCATAGTCAAGAGGAAGCAAATATGAAATTCAGGAGC 1 1 5' arm Physcomitrella_patens mirbase 100 ppt-MIR902e 1e-71 -54.3 ....((...((.((..((((.(((((.((.(.(((((((((((((.((((.((((.(((((((.........))))))).)))).))))))))))))))))).).)).))))).))))..))......)).)) (-54.30)