mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TTGACAGAAGAGAGTNAGCAC GCTCGCTCCTCTTTCTGTCAGCA AGCATATGAAAGGCGAGATTGTTGACAGAAGAGAGTNAGCACACGGCGCGGCGGCTAGCCATCGGGGNGATGCCTGCCCCNGCCGCGTGCTCGCTCCTCTTTCTGTCAGCATCTCTCATCANTCCCTCC TTCACATTCAGTGCACCCCAAACACCAAGAACTCCTCCTTTTTTTCTCCTGTAATAATCCTGTACCCTCTCTCTCTATCTCCCTGCAGCTGCTGCCTAGCTCCAGTACGGCCACCGTCGTCGATCGGTCTCTCTCTCTCACCGGATCCGAGAAGCAAAGAACCGATCTTTTTTCTTCTTTTTTCCCCTGCGTGATGCTTCTTGTTTACTACTACGTGGGTGCAGTGCAGGTTTGTTGATCGATCTTGGGGCGGGGCGGGATCGAGCATATGAAAGGCGAGATTGTTGACAGAAGAGAGTNAGCACACGGCGCGGCGGCTAGCCATCGGGGNGATGCCTGCCCCNGCCGCGTGCTCGCTCCTCTTTCTGTCAGCATCTCTCATCANTCCCTCCCGCATCCCCCGCCCCGATCT 2 2 5' arm Oryza_sativa mirnest mir-156 1e-35 osa-MIR156j 1e-59 -53.1 .......((..((.((((.((((((((((((.((((.(((((.((((..((.(((.((.((((.....)))).))))))).)))).))))).))))...))))))))))))..)))).))..))..... (-53.1)