mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TAAACTAATCACGGAAATGCA AATTTCCATTTAATGAGTTTAGT TTCTAAACTAATCACGGAAATGCAAAAATTGGATACTACACTATCAACTTTTTTCTTTTGTTCTCTTTATCTCGTGAATTTCCATTTAATGAGTTTAGTT 7 2 5' arm Arabidopsis_thaliana mirbase 100 100 -11.41 ..(((((((......((((((.((.....((((....(((..................)))....)))).....)).))))))........))))))).. (-11.41)