mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CGCTATCCATCCTGAGTTTC AGCTCAGGAGGGATAGCGCC AGAATCTGTAAAGCTCAGGAGGGATAGCGCCATGGATGATCTTCTCTTCACTCTTGATCTTCTCTTGCGCTATCCATCCTGAGTTTCATGGCTTCTATCTTCACA 2 0 3' arm Glycine_max mirbase MIR390 1e-50 gma-MIR390a 6e-55 -44.44 ((((.((((.((((((((((.(((((((((...(((.((((..............)))).)))...))))))))).)))))))))).)))).))))......... (-44.44)