mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TTGGCATTCTGTCCACCTCC AGGTGGGCATACTGCCAACT CTTCTTACAGAGTTTATTGGCATTCTGTCCACCTCCGTTCCCCATCGATTGAATCTGAAAGCCTTTTTCTTTTCTTGTTTTTGTGCTTCTCTCTTTCATGCTCATGGAGGTGGGCATACTGCCAACTGAGCTCTGTTGGCTTCTCTT 2 0 5' arm Citrus_sinensis mirbase MIR394 0.000000000002 tcc-MIR394a 3e-17 -49.8 ...((.((((((((((((((((.(.(((((((((((((....(((.((..((....(((.(((.....(.......).....).)))))..))..)))))...))))))))))))).).)))))).)))))))))).))........ (-49.80)