mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TCGCTTGGTGCAGGTCGGGAA CCCGCCTTGCATCAACTGAAT GGTCTCTGATTCGCTTGGTGCAGGTCGGGAACTGATTCGGCGATTTGATTGCCAGATGGCTCGACATGACTGGTTGTTGTGGAAAAAGAAAAGGAAGGAAACAGGAAAAAAAACAAAGAATAGCGAATTGGATCCCGCCTTGCATCAACTGAATCGGAGG 3 0 5' arm Populus_trichocarpa mirbase MIR168 1e-38 ptc-MIR168b 4e-26 -61 ...((((((((((.((((((((((.(((((.(..(((((.(..((((...(((....)))....((..((.....))..))...............(....)...........)))).....))))))..).))))).)))))))))).)))))))))). (-61.00)