mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGATTGAGCCGCGCCAATATC CTCGCGCGCCAGTGGAATTGCC GAGGTAGGAGGCGGAGCGGAGGAAAGGCTTCCCGACCGGGGGAAGCTGGTGATTGAGCCGCGCCAATATCTCTCGCGCGCCAGTGGAATTGCCGGCTTCAGCTGCTTTCGCCGCCGCAGC 11 3 5' arm Brachypodium_distachyon mirbase MIR171_1 0.00003 osa-MIR171a 0.000001 -53.1 ..........((((.(((((((...(((..(((....))).((((((((..(((..(((((((...........)))))...))..)))..)))))))).))).)))))))..))))... (-53.10)