mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CTGTACCCTCTCTCTTCTTC AGAAGAGAGAGAGTACAGCC GAAGAAGAGAGAGAGTACAGCCTTAGTTCAGATCACATATGACTATCTTTTGCGAGTCTGATCGATACTCTGATGAAGGCTGTACCCTCTCTCTTCTTC 1 0 3' arm Oryza_sativa mirbase MIR529 4e-50 zma-MIR529 0.000000001 -47.77 (((((((((((((.((((((((((...(((((........((((..(....)..))))..........)))))..)))))))))).))))))))))))) (-47.77)