mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GTGAAGTGTTTGGGGGAACTC GTTCTCTGCAAACACTTCACAA TCAAGTTTGGTGTCCCCAGGAGTTCTCTGCAAACACTTCACAAAGCACTTTTTTAGAGCTTTTGTGAAGTGTTTGGGGGAACTCTTGGTGCCACTGATCATTT 0 1 3' arm Sorghum_bicolor mirbase mir-395 9e-42 sbi-MIR395e 4e-28 -51.9 ....(.(..(((.(.(((((((((((((.(((((((((((((((((.((.....)).)).)))))))))))))))))))))))))))).).)))..).).... (-51.90)