mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGCCAAAGGAGAATTGCCCTG GGGCAGTTCGTCTTTGGCACA TGCCGGCGCCGGCGAATTACGGGGCAGTTCGTCTTTGGCACAAAGGCACGTCCAGAACTACTCGATGAGGGTCACTTGAGCTGAACTGAACATGCGTGCCAAAGGAGAATTGCCCTGCGATTCGCCCGTGCAGAAG 2 0 3' arm Sorghum_bicolor mirbase mir-399 2e-61 osa-MIR399c 0.000000000007 -69.6 .....((((.(((((((..(((((((((((..(((((((((....(((.((.(((..(..(((((((.....)).)))))..)..))).)).))))))))))))..)))))))))))..))))))).))))..... (-69.60)