mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CAACAACAACAAGAAGAAGAAGAT CTTCTTCTTCTTGTTGTTGTTGTT CCACGCGTCCGGCATTCTTCTTCTTCTTGTTGTTGTTGTTGTAATGGATTTGGAGGAGGAGGAGGAGGAGGAGCTGCTGTTGATGCTCCTAGTACAACAAATAAGGAGGCGGCGGAGGAGGAGCAACAACAACAAGAAGAAGAAGATTTGGGCTTGAAGCTGCAGCTGCAACAACATGTA 1 0 3' arm Triticum_aestivum mirbase 100 far-MIR1134 0.0001 -60.6 ......((((((...(((((((((((((((((((((((((.(......(((......))).............(((((((.....(((((.((.......)).))))))))))))....).))))))))))))))))))))))))).)))))).((.(((....))).)).......... (-60.60)