mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TGAGATCGCGATTAAAGCTGGT CGGCTTTTATTGCGCTCTGAGA ATAGGCAAGTCGGCTTTTATTGCGCTCTGAGAAAAACCAATTCATTGCTTTTTTTTATTTATCTGAGATCGCGATTAAAGCTGGTTTTCCATTTG 5 0 3' arm Schistosoma_japonicum 19997615 100 sja-bantam 2e-23 -27.5 ...((.((..(((((((.((((((.(((.(((((((.(((....))).)))).........))).))).)))))).)))))))..)).))..... (-27.50)